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  3. LSF jobs never finishing

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LSF jobs never finishing

BradW
BradW over 13 years ago

Hello,

I've been using LSF to launch ADEXL jobs for some time now without issue but lately I've been having trouble with LSF jobs launched from ADEXL not finishing.  The individual APS jobs finish and I get results but I have to manually go kill a ton of jobs from the LSF queues because ADEXL doesn't seem to be cleaning up after itself.  Has anyone seen this before?

Here is some more detail.  On the "Job Policy Setup" I have
Start Timeout = 120
Configure Timeout=300
LingerTime=60

Also, I'm using the "Command" Distribution Method (not LBS).  I have to use the command because I need to reserve multiple processors and to my knowledge this isn't possible with LBS.  The specific command I use is

bsub -q medium -n 4 -R 'span[hosts=1]'

Any thoughts? 

Thanks

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  • Andrew Beckett
    Andrew Beckett over 13 years ago

    Thanks - I'll keep an eye on the CCR that was filed with R&D for this.

    Andrew.

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  • Andrew Beckett
    Andrew Beckett over 13 years ago

    Thanks - I'll keep an eye on the CCR that was filed with R&D for this.

    Andrew.

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